An integrated functional genomics approach identifies the regulatory network directed by brachyury in chordoma

ABSTRACT: shRNA-mediated brachyury knockdown was performed on the chordoma cell line U-CH1 as replicates. RNA was extracted, labelled and hybridised to Human Gene 1.0ST chips followed by gene expression microarray analysis.This was followed by a ChIP-seq experiment using a specific brachyury antibody, the data for which are stored in Raw ChIP-seq reads are stored under: European Nucleotide Archive accession ERP000953 and Array Express accession E-ERAD-23.

ORGANISM(S): Homo sapiens

SUBMITTER: Nischalan Pillay 

PROVIDER: E-MEXP-3716 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress