Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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MRNA Sequencing of STG in schizophrenia


ABSTRACT: The RNA was extracted from post-mortem cortical grey matter of STG from the left hemisphere of 9 pairs of male subjects with schizophrenia and matched non-psychiatric controls. Each sample was subjected to 76 cycles of sequencing from a single end in one lane of Illumina Genome Analyzer II.

ORGANISM(S): Homo sapiens

SUBMITTER: Xi Wang 

PROVIDER: E-MTAB-1030 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Transcriptome sequencing revealed significant alteration of cortical promoter usage and splicing in schizophrenia.

Wu Jing Qin JQ   Wang Xi X   Beveridge Natalie J NJ   Tooney Paul A PA   Scott Rodney J RJ   Carr Vaughan J VJ   Cairns Murray J MJ  

PloS one 20120427 4


<h4>Background</h4>While hybridization based analysis of the cortical transcriptome has provided important insight into the neuropathology of schizophrenia, it represents a restricted view of disease-associated gene activity based on predetermined probes. By contrast, sequencing technology can provide un-biased analysis of transcription at nucleotide resolution. Here we use this approach to investigate schizophrenia-associated cortical gene expression.<h4>Methodology/principal findings</h4>The d  ...[more]

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