Browse
Submit Data
Databases
API
Help

Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

68 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq of skin lesions at day 2 post infection with Group A Streptococcus from Hif1a(fl/fl) and Ncr1(Cre)Hif1a(fl/fl) mice

ABSTRACT: Changes of the transcriptional program in response to bacterial infections at a skin-wide level by deletion of HIF-1α in skin-lesions-infiltrating NK cells.

INSTRUMENT(S): Illumina HiSeq 2000

ORGANISM(S): Mus musculus

SUBMITTER: Christian Stockmann

PROVIDER: E-MTAB-10700 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Shared Molecules

Only show the datasets with similarity scores above: 0.5

Threshold

0.5

Similar Datasets

RNA-seq of skin wounds at day 2 post wounding from Hif1a(fl/fl) and Ncr1(Cre)Hif1a(fl/fl) mice

Project description:Global alterations of the early wound healing program by transcriptomics at a skin-wide level by deletion of HIF-1α in wound-infiltrating NK cells.

2021-07-10 | E-MTAB-10699 | biostudies-arrayexpress

RNA-seq of small intestine tissues from Hif1a(fl/fl) and Ncr1(Cre)Hif1a(fl/fl) mice

Project description:Global alterations in gene expression in the small intestine triggered by HIF-1a loss in NKp46+ cells.

2021-12-10 | E-MTAB-11213 | biostudies-arrayexpress

RNA-seq of splenic natural killer cells from Hif1a(fl/fl) and Ncr1(Cre)Hif1a(fl/fl) mice

Project description:Alteration of gene expression in natural killer cells triggers by HIF-1a loss.

2022-08-22 | E-MTAB-12082 | biostudies-arrayexpress

RNA-seq of colonic tissues at day 4 post Dextran sulfate sodium (DSS)-induced colitis from Hif1a(fl/fl) and Ncr1(Cre)Hif1a(fl/fl) mice.

Project description:Global alterations in gene expression in the damaged colon triggered by HIF-1a loss in NKp46+ cells.

2021-12-10 | E-MTAB-11215 | biostudies-arrayexpress

RNA-seq of colonic tissues from Hif1a(fl/fl) and Ncr1(Cre)Hif1a(fl/fl) mice

Project description:Global alterations in gene expression in the colon triggered by HIF-1a loss in NKp46+ cells.

2021-12-10 | E-MTAB-11214 | biostudies-arrayexpress

RNA-seq of small intestine tissues from VHL(fl/fl) and Ncr1(Cre)VHL(fl/fl) mice

Project description:Global alterations in gene expression in the small intestine triggered by HIF-1a activation in NKp46+ cells.

2021-12-10 | E-MTAB-11212 | biostudies-arrayexpress

RNAseq of primary osteoblasts isolated from Prx1-CreWT HuRfl/fl and Prx1Cre+/- HuRfl/fl mouse long bone

Project description:Primary osteoblasts were cultured from long bones of Prx1-CreWT HuRfl/fl (Control) and Prx1Cre+/- HuRfl/fl (Developing limb mesenchyme knockout of HuR) mice. Total RNA was extracted from these cells using Trizol method and RNA-Seq used to detect differential gene expression.

2025-03-14 | E-MTAB-14888 | biostudies-arrayexpress

RNA-seq to investigate the effect of SA112 a novel PPAR ligand in HepG2 cells

Project description:This study evaluated the effects of a novel type of PPAR ligand on gene expression in HepG2 cells

2023-03-01 | E-MTAB-12166 | biostudies-arrayexpress

Single cell RNA sequencing of intestinal NKp46+ innate lymphoid cells (ILCs) from Hif1a(fl/fl) and Ncr1(Cre)Hif1a(fl/fl) mice

Project description:The unbiased approach to determine transcriptional profiles of sorted NKp46+ cells from the small intestine of WT and HIF-1α KO mice.

2021-12-18 | E-MTAB-11238 | biostudies-arrayexpress