RNAseq of leaves of tomato plants infected with a combination of four below- and above ground pathogens

ABSTRACT: In this experiment we measured the transcriptional response of tomato plants (cv “Money maker”) when attacked belowground by the nematode M. inognita and, subsequently, aboveground by different (and common for this crop) biotic agents. Three weeks-old plants were exposed to nematodes for 5 days. At the fifth day the terminal leaflet of one of the first two true leaves was infected with the Cauliflower Mosaic Virus, or with the pathogen, or with the potato aphid Macrosiphum euphorbiae, or with the CMV-infected M. euphorbiae. For each belowground/aboveground combination treatment a set of control plants that received only the aboveground treatment was prepared. The infected leaflets of 5 biological replicates, each consisting of 1 plant, were collected 1, 2, 3, 4, 5 and 6 days after the ons

INSTRUMENT(S): DNBSEQ-T7, Maxwell® 16 AS2000

ORGANISM(S): Solanum lycopersicum

SUBMITTER:  

PROVIDER: E-MTAB-11956 | biostudies-arrayexpress |

SECONDARY ACCESSION(S): ERP139606

REPOSITORIES: biostudies-arrayexpress