Browse
Submit Data
Databases
API
Help

Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genome instability of aneuploids in Candida albicans

ABSTRACT: In C. albicans, four aneuploid strains, each bearing a unique karyotype, were daily passaged in YPD broth. After 10 passages, the adaptors were sequenced.

INSTRUMENT(S): DNBSEQ-T7

ORGANISM(S): Candida albicans

SUBMITTER: Sun Liuliu

PROVIDER: E-MTAB-12469 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Whole genome sequencing of papillary colonies on YPD plate supplemented with tebuconazole in Candida albicans

Project description:Candida albicans lab strain SC5314 was spotted on YPD plates supplemented with 0.25-16 μg/ml tebuconazole. Randomly at least 4 papillary colonies from each plate were sequenced.

2023-08-31 | E-MTAB-13245 | biostudies-arrayexpress

Whole genome sequencing of deletion strains of Candida albicans CDR1, CDR2, MDR1, CMP1, CNB1 and CRZ1 derived tebuconazole adaptors

Project description:From C. albicans reference strain SC5314, CDR1, CDR2, MDR1, CMP1, CNB1, CRZ1 were deleted. The deletion strains were spread on YPD plates supplemented with tebuconazole. Randomly 4 adaptors derived from each deletion strain were sequenced.

2023-08-09 | E-MTAB-13238 | biostudies-arrayexpress

Whole genome sequencing of unstable tebuconazole adaptors in Candida albicans

Project description:Two tebuconazole adaptors, TJ1503 and TJ1669, were unstable. On YPD-agar plates, they gave rise to small (S) and large (L) colonies. We sequenced both types of colonies. TJ1503S and TJ1669S were the S colonies. TJ1503L and TJ1669L were the large colonies.

2023-09-06 | E-MTAB-13209 | biostudies-arrayexpress

Whole genome sequencing of fluconazole-resistant mutants in Candida haemulonii

Project description:Candida haemulonii wild type strain TJ180 were expsoured to 64 and 128 μg/ml fluconazole. 14 resistant mutants as well as the parent were sequenced.

2024-01-10 | E-MTAB-13199 | biostudies-arrayexpress

Whole genome sequencing of ketoconazole adaptors in Candida albicans

Project description:Candida albicans lab strain SC5314 was spread on YPD plates supplemented with ketoconazole (0.125-16μg/ml); Randomly 3 adaptors from each plate were sequenced.

2023-06-15 | E-MTAB-12803 | biostudies-arrayexpress

Whole genome sequencing of tebuconazole adaptors in Candida auris

Project description:Candida auris clinical isolate FY279 was exposed to tebuconazole (32μg/ml). Randomly14 adaptors were chosen. 10 adaptors obtained resistance to tebuconazole. These resistant adaptors were sequenced.

2023-05-10 | E-MTAB-12802 | biostudies-arrayexpress

Whole genome sequencing of tebuconazole adaptors derived in Candida albicans

Project description:Candida albicans lab strain SC5314 was exposed to tebuconazole (0.25μg/ml - 16 μg/ml). Randomly 32 adaptors were sequenced.

2023-04-30 | E-MTAB-12801 | biostudies-arrayexpress

Whole genome sequencing of amphotericin B adaptors in Candida parapsilosis #12584-AMB adaptors-TJ2897-TJ2935

Project description:Candida parapsilosis clinical isolate #12584 was exposed to 3μg/ml and 4μg/ml amphotericin B. Randomly 30 adaptors (3 μg/ml) and 99 adaptors (4 μg/ml) were sequenced.

2023-08-09 | E-MTAB-12680 | biostudies-arrayexpress

Whole genome sequencing of VMA11 deletion strain derived fluconazole adaptors in Candida albicans

Project description:Candida albicans strains SC5314 and YJB-T1891 were used as wild type to delete VMA11. The deletion strains (TJ926 and TJ927) were spread on YPD plate supplemented with 1μg/ml fluconazole. Randomly 96 adaptors derived from TJ926 and 96 adaptors derived from TJ927 were tested with disk diffusion assay. Among the resistant adaptors, randomly 15 adaptors (A4-A18) and 48 adaptors (A19-A66) derived from TJ926 were sequenced.

2023-02-28 | E-MTAB-12673 | biostudies-arrayexpress

Whole genome sequencing of aureobasidin A adadaptors in Candid tropicalis

Project description:Candida tropicalis clinical isolate #12584 was exposed to auerobasidin A (50ng/ml), Randomly 30 adaptors (T12-T41) were selected. These adaptors as well as the parent were sequenced.

2023-09-12 | E-MTAB-12672 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data