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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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RNA-seq of Arabidopsis thaliana seedlings to investigate ZAT14 inducible misexpression - TRANSPLANTA collection

ABSTRACT: To identify targets of the C2H2 zinc finger protein ZINC 34 FINGER OF ARABIDOPSIS THALIANA 14 (ZAT14, AT5G03510), we used an estradiol-inducible system for inducible expression of ZAT14, comparing gene expression in estradiol-treated plants and mock-treated 5-day old seedlings 8 hours after estradiol or mock treatment.

INSTRUMENT(S): Sigma-Aldrich, NextSeq 500

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Plant Systems Biology data submission

PROVIDER: E-MTAB-12843 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Repressive ZINC FINGER OF ARABIDOPSIS THALIANA proteins promote programmed cell death in the Arabidopsis columella root cap.

Feng Qiangnan Q Cubría-Radío Marta M Vavrdová Tereza T De Winter Freya F Schilling Neeltje N Huysmans Marlies M Nanda Amrit K AK Melnyk Charles W CW Nowack Moritz K MK Nowack Moritz K MK

Plant physiology 20230501 2

Developmental programmed cell death (dPCD) controls a plethora of functions in plant growth and reproduction. In the root cap of Arabidopsis (Arabidopsis thaliana), dPCD functions to control organ size in balance with the continuous stem cell activity in the root meristem. Key regulators of root cap dPCD including SOMBRERO/ANAC033 (SMB) belong to the NAC family of transcription factors. Here, we identify the C2H2 zinc finger protein ZINC FINGER OF ARABIDOPSIS THALIANA 14 ZAT14 as part of the gen ...[more]

PMID: 36852889

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