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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Histone ChIP-seq for the detection of active elements (H3K4me1, H3K4me3, H3K27ac, input control) in a selection of cancer cell lines

ABSTRACT: Histone ChIP-seq was performed in the ovarian cancer cell lines COV-434, ES-2, Kuramochi, OAW28, OAW42, OVISE, SKOV-3, TOV-112D and several other cancer cell lines (BxPC-3, Caco2, Capan2, F36P, HEL, HT29, MDA-MB231, MDA-MB-468, MiaPaCa2, NCIH520, RERF-LC-MS, SkLu1, SW480, T47D and U-937). For the detection of active elements in the genome, the distribution of the active histone markers H3K4me1, H3K4me3 and H3K27ac was screened. An input sample was used as a control for each cell line.

INSTRUMENT(S): Illumina HiSeq 2000

ORGANISM(S): Homo sapiens

SUBMITTER: Leonie Smeenk

PROVIDER: E-MTAB-14771 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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