Genome wide % Methylation of CpG, CHH, CHG

ABSTRACT: This dataset presents genome-wide DNA methylation profiles across CpG, CHH, and CHG sequence contexts in experimental samples, including control and treatment groups. For each genomic context, the dataset includes raw CpG counts, the proportion of highly methylated sites (PropHighMeth), the proportion of lowly methylated sites (PropLowMeth), and related quantitative metrics. Sample annotations specify experimental conditions and replicate identifiers. The dataset provides a comprehensive view of DNA methylation patterns, supporting downstream analyses, comparison across conditions, and integration with gene expression or protein-level data.

INSTRUMENT(S): Centrifuge, Illumina NovaSeq X, Institutional high-performance computing cluster (Linux-based), Incubator, Centrifuge, PCR

ORGANISM(S): Homo sapiens

SUBMITTER: Arif Hussain 

PROVIDER: E-MTAB-16669 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress