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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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RNA-seq of coding RNA from tissue samples of 122 human individuals representing 32 different tissues

ABSTRACT: RNA-seq was performed of tissue samples from 122 human individuals representing 32 different tissues in order to study the human tissue transcriptome. This submission contains 27 new samples and the data from E-MTAB-1733. This dataset is part of the TransQST collection.

INSTRUMENT(S): Illumina HiSeq 2500, Illumina HiSeq 2000

ORGANISM(S): Homo sapiens

SUBMITTER: Björn Hallström

PROVIDER: E-MTAB-2836 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

The Urinary Bladder Transcriptome and Proteome Defined by Transcriptomics and Antibody-Based Profiling.

Habuka Masato M Fagerberg Linn L Hallström Björn M BM Pontén Fredrik F Yamamoto Tadashi T Uhlen Mathias M

PloS one 20151222 12

To understand functions and diseases of urinary bladder, it is important to define its molecular constituents and their roles in urinary bladder biology. Here, we performed genome-wide deep RNA sequencing analysis of human urinary bladder samples and identified genes up-regulated in the urinary bladder by comparing the transcriptome data to those of all other major human tissue types. 90 protein-coding genes were elevated in the urinary bladder, either with enhanced expression uniquely in the ur ...[more]

PMID: 26694548

Publication: 1/3

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