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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Physcomitrella transcriptome atlas

ABSTRACT: ***This experiment was updated on 26-02-2016 to correct the accidental mis-labelling of some raw data files. For data downloaded before this date, please note that the file labelled as Caulonema_a.pair contains the raw data for Chloronema A and the file labelled as Chloronema_a.pair contains the data for Caulonema A. ***** We analyzed the transcriptional profile of all phases in the life cycle of P. patens, including all major tissues and 4 different sporophyte developmental stages. For this analysis we took advantage of a custom designed NimbleGene microarray based on genome version 1.6, and developed adequate protocols for the isolation and purification of mRNA directly from mechanically purified cells of chloronema, caulonema, rhizoids, gametophores, sporophytes, spores, archegonia and protoplasts.

INSTRUMENT(S): Agilent 2100 Bioanalyzer, Hybridization system 4 station, Roche Nimblegen MS200 scanner

ORGANISM(S): Physcomitrella patens

SUBMITTER: Jörg Becker

PROVIDER: E-MTAB-3069 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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