Transcriptomic profiling of rice (Oryza sativa) cv. Sijung and Jumli Marshi during early chilling stress

ABSTRACT: The aim of this study was to conduct global gene expression profiling and comparative analysis of two chilling tolerant rice varieties, Jumli Marshi and Sijung (spp. Japonica), during early chilling stress (24h, 10C). Leaf tissue from cv. Jumli Marshi and cv. Sijung plants grown under chilling stress conditions were harvested after 4 and 24 h. Control plants (0 h) were harvested at the beginning of the experiment, i.e., at mid-day. Three biological replicates were profiled for each time point and variety. In order to readily detect highly (saturated) as well as weakly (near background signal) expressed genes, scanning was done twice on the microarrays: at the PMT sensitivity level 100% (pmt100) and 10% (pmt10).

ORGANISM(S): Oryza sativa

SUBMITTER: Olof Olsson 

PROVIDER: E-MTAB-3121 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress