A comprehensive human expression map
Ontology highlight
ABSTRACT:
ORGANISM(S): Homo sapiens
SUBMITTER: Aurora Torrente
PROVIDER: E-MTAB-3732 | biostudies-arrayexpress |
REPOSITORIES: biostudies-arrayexpress
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Project description:Mizuno2012 - AlzPathway: a comprehensive map
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Non-kinetic molecular map.
Pure SBML file of AlzPathway provided by the authors as
Additional file 5.
This model is described in the article:
AlzPathway: a comprehensive
map of signaling pathways of Alzheimer's disease.
Mizuno S, Iijima R, Ogishima S,
Kikuchi M, Matsuoka Y, Ghosh S, Miyamoto T, Miyashita A, Kuwano
R, Tanaka H.
BMC Syst Biol 2012; 6: 52
Abstract:
BACKGROUND: Alzheimer's disease (AD) is the most common
cause of dementia among the elderly. To clarify pathogenesis of
AD, thousands of reports have been accumulating. However,
knowledge of signaling pathways in the field of AD has not been
compiled as a database before. DESCRIPTION: Here, we have
constructed a publicly available pathway map called
"AlzPathway" that comprehensively catalogs signaling pathways
in the field of AD. We have collected and manually curated over
100 review articles related to AD, and have built an AD pathway
map using CellDesigner. AlzPathway is currently composed of
1347 molecules and 1070 reactions in neuron, brain blood
barrier, presynaptic, postsynaptic, astrocyte, and microglial
cells and their cellular localizations. AlzPathway is available
as both the SBML (Systems Biology Markup Language) map for
CellDesigner and the high resolution image map. AlzPathway is
also available as a web service (online map) based on Payao
system, a community-based, collaborative web service platform
for pathway model curation, enabling continuous updates by AD
researchers. CONCLUSIONS: AlzPathway is the first comprehensive
map of intra, inter and extra cellular AD signaling pathways
which can enable mechanistic deciphering of AD pathogenesis.
The AlzPathway map is accessible at http://alzpathway.org/.
This model is hosted on
BioModels Database
and identified by:
MODEL1504290001.
To cite BioModels Database, please use:
BioModels Database:
An enhanced, curated and annotated resource for published
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To the extent possible under law, all copyright and related or
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