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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Zea mays Transcriptome or Gene expression

ABSTRACT: We report the generation of RNA-seq and ribosome profiling data on 14-day maize seedling before and after drought stress treatment. We performed RNA-seq and ribosome profiling on both well-watered (WW) and drought-stressed (DS) maize seedlings. Both data types had two biological replicates. Note: Samples in SRA were assigned the same sample accession. This is incorrect as there are different samples, hence “Source Name” was replaced with new values. Comment[ENA_SAMPLE] contains the original SRA sample accessions.

INSTRUMENT(S): Illumina HiSeq 2500

ORGANISM(S): Zea mays

SUBMITTER: Jinsheng Lai

PROVIDER: E-MTAB-4198 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Ribosome profiling reveals dynamic translational landscape in maize seedlings under drought stress.

Lei Lei L Shi Junpeng J Chen Jian J Zhang Mei M Sun Silong S Xie Shaojun S Li Xiaojie X Zeng Biao B Peng Lizeng L Hauck Andrew A Zhao Haiming H Song Weibin W Fan Zaifeng Z Lai Jinsheng J

The Plant journal : for cell and molecular biology 20151201 6

Plants can respond to environmental changes with various mechanisms occurred at transcriptional and translational levels. Thus far, there have been relatively extensive understandings of stress responses of plants on transcriptional level, while little information is known about that on translational level. To uncover the landscape of translation in plants in response to drought stress, we performed the recently developed ribosome profiling assay with maize seedlings growing under normal and dro ...[more]

PMID: 26568274

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