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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Glycine Max Transcriptome or Gene expression

ABSTRACT: RNA-seq of two soybean accessions under water deficit

INSTRUMENT(S): Illumina HiSeq 2000

ORGANISM(S): Glycine max

SUBMITTER: Jin Shin

PROVIDER: E-MTAB-4352 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Transcriptomic changes due to water deficit define a general soybean response and accession-specific pathways for drought avoidance.

Shin Jin Hee JH Vaughn Justin N JN Abdel-Haleem Hussein H Chavarro Carolina C Abernathy Brian B Kim Kyung Do KD Jackson Scott A SA Li Zenglu Z

BMC plant biology 20150203

<h4>Background</h4>Among abiotic stresses, drought is the most common reducer of crop yields. The slow-wilting soybean genotype PI 416937 is somewhat robust to water deficit and has been used previously to map the trait in a bi-parental population. Since drought stress response is a complex biological process, whole genome transcriptome analysis was performed to obtain a deeper understanding of the drought response in soybean.<h4>Results</h4>Contrasting data from PI 416937 and the cultivar 'Benn ...[more]

PMID: 25644024

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