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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Glycine max Transcriptome or Gene expression

ABSTRACT: Virus Induced Gene Silencing (VIGS) was used to silence the expression of soybean Replication Protein 3 (GmRPA3). RNAseq was used to compare gene expression in GmRPA3 silenced and empty vector treated plants

INSTRUMENT(S): Illumina HiSeq 2000

ORGANISM(S): Glycine max

SUBMITTER: Michelle Graham

PROVIDER: E-MTAB-4354 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Replication protein A subunit 3 and the iron efficiency response in soybean.

Atwood Sarah E SE O'Rourke Jamie A JA Peiffer Gregory A GA Yin Tengfei T Majumder Mahbubul M Zhang Chunquan C Cianzio Silvia R SR Hill John H JH Cook Dianne D Whitham Steven A SA Shoemaker Randy C RC Graham Michelle A MA

Plant, cell & environment 20130722 1

In soybean [Glycine max (L.) Merr.], iron deficiency results in interveinal chlorosis and decreased photosynthetic capacity, leading to stunting and yield loss. In this study, gene expression analyses investigated the role of soybean replication protein A (RPA) subunits during iron stress. Nine RPA homologs were significantly differentially expressed in response to iron stress in the near isogenic lines (NILs) Clark (iron efficient) and Isoclark (iron inefficient). RPA homologs exhibited opposin ...[more]

PMID: 23742135

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