Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

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Arabidopsis thaliana strain:Col 0 Transcriptome or Gene expression

ABSTRACT: We intend to provide a high resolution compendium of changes in gene expression of Arabidopsis root upon exposure to Fe starvation, an important abiotic stress.

INSTRUMENT(S): Illumina Genome Analyzer II

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Wenfeng Li 

PROVIDER: E-MTAB-4391 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Genome-wide analysis of overlapping genes regulated by iron deficiency and phosphate starvation reveals new interactions in Arabidopsis roots.

Li Wenfeng W   Lan Ping P  

BMC research notes 20151012

<h4>Background</h4>Iron (Fe) and phosphorus (P) are essential mineral nutrients in plants. Knowledge regarding global changes in the abundance of Fe-responsive genes under Pi deficiency as well as the processes these genes are involved in remains largely unavailable at the genome level. In the current study, we comparatively analyzed RNA sequencing data sets relative to Fe deficiency (NCBI: SRP044814) and Pi starvation (NCBI: SRA050356.1).<h4>Results</h4>Analysis showed a total of 579 overlappin  ...[more]

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