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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Arabidopsis thaliana CPL3 RNASeq

ABSTRACT: To determine transcriptome dynamics regulated by CPL3 during elicitation of immune responses, we performed RNA sequencing (RNA-seq) analysis of Col-0 WT and cpl3-3 mutant treated without or with flg22 for 30 min.

INSTRUMENT(S): Illumina HiSeq 2000

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Ping He

PROVIDER: E-MTAB-4397 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Modulation of RNA polymerase II phosphorylation downstream of pathogen perception orchestrates plant immunity.

Li Fangjun F Cheng Cheng C Cui Fuhao F de Oliveira Marcos V V MV Yu Xiao X Meng Xiangzong X Intorne Aline C AC Babilonia Kevin K Li Maoying M Li Bo B Chen Sixue S Ma Xianfeng X Xiao Shunyuan S Zheng Yi Y Fei Zhangjun Z Metz Richard P RP Johnson Charles D CD Koiwa Hisashi H Sun Wenxian W Li Zhaohu Z de Souza Filho Gonçalo A GA Shan Libo L He Ping P

Cell host & microbe 20141126 6

Perception of microbe-associated molecular patterns (MAMPs) elicits host transcriptional reprogramming as part of the immune response. Although pathogen perception is well studied, the signaling networks orchestrating immune gene expression remain less clear. In a genetic screen for components involved in the early immune gene transcription reprogramming, we identified Arabidopsis RNA polymerase II C-terminal domain (CTD) phosphatase-like 3 (CPL3) as a negative regulator of immune gene expressio ...[more]

PMID: 25464831

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