Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

11 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

A network of paralogous stress response transcription factors in the human pathogen Candida glabrata

ABSTRACT: We analyzed the role of the seven Yap transcription factors of C. glabrata by comparing the transcriptome of mutant strains deleted for these CgYAP with the transcriptome of the wild type strain. These experiments were conducted in various stress conditions.

ORGANISM(S): Candida glabrata

SUBMITTER: Frederic Devaux

PROVIDER: E-MTAB-4457 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Transcriptome analyses of the response of C. glabrata wild type cells to iron excess, salt excess, cadmium treatment and iron starvation

Project description:A Candida glabrata wild type strain (HTL, as described in Schwartzmuller et al., PLoS Pathog. 2014 Jun 19;10(6):e1004211) was submitted to various stress conditions (iron excess, salt excess, cadmium treatment and iron starvation (BPS treatment). The cells were collected 20 and 40 minutes after the beginning of treatments and their transcriptomes were compared to those of mock treated cells.

2018-11-12 | E-MTAB-7043 | biostudies-arrayexpress

Transcriptome analyses of the impact of Hap5 transcription factor in the pathogenic yeast Candida glabrata

Project description:To measure the impact of Hap5 regulation on its targets, we performed transcriptome analyses comparing gene expression in a hap5 deletion mutant and in wild type cells. Because our ChIP-seq results showed an interaction between Hap5 and the targets of Yap5, we performed these transcriptome experiments on cells grown in three different conditions: standard rich media, iron excess and iron starvation.

2017-03-31 | E-MTAB-5348 | biostudies-arrayexpress

Transcriptome analyses of a C. glabrata strain deleted for the transcription factor Aft2.

Project description:In these experiments, we compared the transcriptomes of a wild type strain and an aft2 deleted strain of the pathogenic yeast Candida glabrata. The comparisons were performed in four different growth conditions: iron starvation (BPS treatment), selenite treatment, cadmium treatment and optimal growth conditions (YPD).

2018-11-12 | E-MTAB-7042 | biostudies-arrayexpress

Selenite treatment of a Candida glabrata wild type strain

Project description:In the frame of a multispecies project, Candida glabrata cells were treated with 1 mM sodium selenite. Cells were collected 10, 20, 30, 40, 50, 60, 70 and 80 minutes after the treatment and their transcriptomes were compared to those of mock-treated cultures. Four independent biological replicates were performed.

2018-11-12 | E-MTAB-7023 | biostudies-arrayexpress

Selenite treatment of a Saccharomyces cerevisiae wild type strain.

Project description:In the frame of a multispecies project, Saccharomyces cerevisiae cells were treated with 10 mM sodium selenite. Cells were collected 10, 20, 30, 40, 50, 60, 70 and 80 minutes after the treatment and their transcriptomes were compared to those of mock-treated cultures. Four independent biological replicates were performed.

2018-11-12 | E-MTAB-7022 | biostudies-arrayexpress

Selenite treatment of a Lachancea thermotolerans wild type strain

Project description:In the frame of a multispecies project, Lachancea thermotolerans cells were treated with 5 mM sodium selenite. Cells were collected 10, 20, 30, 40, 50, 60, 70 and 80 minutes after the treatment and their transcriptomes were compared to those of mock-treated cultures. Four independent biological replicates were performed.

2018-11-12 | E-MTAB-7045 | biostudies-arrayexpress

Selenite treatment of a Yarrowia lipolytica wild type strain

Project description:In the frame of a multispecies project, Yarrowia lipolytica cells were treated with 10 mM sodium selenite. Cells were collected 10, 20, 30, 40, 50, 60, 70 and 80 minutes after the treatment and their transcriptomes were compared to those of mock-treated cultures. Four independent biological replicates were performed.

2018-11-12 | E-MTAB-7044 | biostudies-arrayexpress

Selenite treatment of a Candida albicans wild type strain

Project description:In the frame of a multispecies project, Candida albicans cells were treated with 0.5 mM sodium selenite. Cells were collected 10, 20, 30, 40, 50, 60, 70 and 80 minutes after the treatment and their transcriptomes were compared to those of mock-treated cultures. Four independent biological replicates were performed.

2018-11-12 | E-MTAB-7053 | biostudies-arrayexpress

Selenite treatment of a Lachancea kluyveri wild type strain

Project description:In the frame of a multispecies project, Lachancea kluyveri cells were treated with 5 mM sodium selenite. Cells were collected 10, 20, 30, 40, 50, 60, 70 and 80 minutes after the treatment and their transcriptomes were compared to those of mock-treated cultures. Four independent biological replicates were performed.

2018-11-12 | E-MTAB-7046 | biostudies-arrayexpress

Selenite treatment of a Kluyveromyces lactis wild type strain

Project description:In the frame of a multispecies project, Kluyveromyces lactis cells were treated with 0.5 mM sodium selenite. Cells were collected 10, 20, 30, 40, 50, 60, 70 and 80 minutes after the treatment and their transcriptomes were compared to those of mock-treated cultures. Four independent biological replicates were performed.

2018-11-12 | E-MTAB-7047 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data