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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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SigD vs WT in both SE and RS media

ABSTRACT: Bacillus amyloliquefaciens FZB42 is a well-studied Gram-positive plant growth-promoting rhizobacteria. In this work we aim to study the effect of the effect of sigD deletion on the transcriptome of FZB42. The transcritomes were compared by two-color microarray of the sigD- mutant and the wildtype of B. amyloliquefaciens FZB42 grown in 1C medium supplemented with soil extract (SE) and in 1C medium supplemented with both SE and maize root exudates (RE). This submission includes data from three independent experiments with three biological replicates. Here a biological replicate means the bacterial culture from one flask used for RNA preparation. The samples were collected by two performers. The experiments were varied in sample performer, the date of the experiment.

ORGANISM(S): Bacillus amyloliquefaciens

SUBMITTER: Ben Fan

PROVIDER: E-MTAB-4636 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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