Longitudinal and Diurnal Experiments of M. hapla and M. truncatula

ABSTRACT: We have infected the model legume Medicago truncatula with Meloidogyne hapla and harvested tissue over a time course. Transcriptome sequencing was performed on each sample using the Illumina RNA-Seq method. [Longitudinal Experiment] RNA was isolated from M. hapla eggs and pre-penetration juveniles (J2) and also from a time course of M. truncatula infected with M. hapla J2 at five time points: 1, 2, 4, 5, and 7 days after inoculation (DAI). Roots (local) and shoots (global) tissues from infected and uninfected plants were sampled. Each sample was loaded on five lanes for sequencing. Collectively, 22 samples were generated in total from - M. hapla egg and J2 (two samples), - infected M. truncatula root 1-2-4-5-7 DAI (five samples), - infected M. truncatula shoot 1-2-4-5-7 DAI (five s

INSTRUMENT(S): Illumina Genome Analyzer IIx

ORGANISM(S): root metagenome

SUBMITTER: Soyeon Cha 

PROVIDER: E-MTAB-4724 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress