RNA seq of different species of Salsoleae with different photosynthetic types

ABSTRACT: Cotyledons and leaf transcriptomes of species of Salsoleae with different photosynthetic types were de novo assembled and analyzed to provide a better understanding of differential gene expression between C3, C2 and C4 species. Total RNA of cotyledons and leaves of different species of Salsoleae with different photosynthetic types (C3 Salsola webbii, C2 Salsola divaricata, C4 Salsola oppositifolia, C4 Hammada scoparia) were isolated with RNeasy Plant Mini Kit (Qiagen) following Standard protocol (January 2011) and including DNase Digestion with RNase-Free DNase Set (Qiagen). 500 ng were used for cDNA library generation conducted with TruSeq RNA Sample Preperation Kit (Illumina Inc.) following Low Sample Protocol (TruSeq RNA Sample Preparation v2 Guide, Illumina Proprietary, Part # 1502649

INSTRUMENT(S): RNeasy Plant Mini Kit, TruSeq RNA Sample Preparation Kit, Illumina HiSeq 2000

ORGANISM(S): Salsola webbii

SUBMITTER: Maximilian Lauterbach 

PROVIDER: E-MTAB-5778 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress