Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

4 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-IP of TAP-tagged 4EIP in Trypanosoma brucei

ABSTRACT: TAP RNA-IP - 4EIP (Tb927.9.11050)

INSTRUMENT(S): Illumina HiSeq 2000

ORGANISM(S): Trypanosoma brucei

SUBMITTER: Christine Clayton

PROVIDER: E-MTAB-6240 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

RNA-IP of TAP-tagged ZC3H32 in bloodstream-form Trypanosoma brucei

Project description:TAP RNA-IP - ZC3H32 (Tb927.10.5250)

2017-12-07 | E-MTAB-5612 | biostudies-arrayexpress

RBP9-TAP RIPseq in Trypanosoma brucei

Project description:RBP9-TAP was expressed in bloodstream T. brucei and bound mRNA was pulled down using IgG beads and eluted via TEV-protease cleavage. rRNA was depleted using RNAseH and rRNA hybridizing oligos.

2020-05-30 | E-MTAB-9093 | biostudies-arrayexpress

RNAseq of DRBD7-TAP interacting RNAs in Trypanosoma brucei

Project description:DRBD7 interacting mRNAs were identified using a DRBD7-TAP fusion protein for protein pulldown. To study enrichment, the flow-through was also subjected to RNAseq.

2020-05-30 | E-MTAB-9092 | biostudies-arrayexpress

TAP RNA-IP - ZC3H22

Project description:TAP RNA-IP - ZC3H22 (Tb927.7.2680)

2018-06-18 | E-MTAB-6906 | biostudies-arrayexpress

TAP RNA-IP - MKT1L

Project description:TAP RNA-IP - MKT1L (Tb927.10.1490)

2018-06-18 | E-MTAB-6904 | biostudies-arrayexpress

TAP RNA-IP - MKT1

Project description:TAP RNA-IP - MKT1 (Tb927.6.4770)

2018-06-18 | E-MTAB-6907 | biostudies-arrayexpress

RNA-IP of TAP-tagged 4EIP in Trypanosoma brucei

Project description:RNA-IP of TAP-tagged 4EIP in Trypanosoma brucei

| PRJEB23807 | ENA

RNA-IP of TAP-tagged ZC3H32 in bloodstream-form Trypanosoma brucei

Project description:RNA-IP of TAP-tagged ZC3H32 in bloodstream-form Trypanosoma brucei

| PRJEB23798 | ENA

RNA-Seq data: RNA-IP (TAP-ZC3H30 pull down followed by RNA-Seq) and total transcriptomics (Effect of ZC3H30 gene deletion) in procyclic form of T. brucei

Project description:The first 4 samples belong to the RNA-IP using in situ TAP tagged ZC3H30 in procyclic (insect) form of the parasite T. brucei Lister 427, 2 samples are Elu or eluate, and 2 are FL or flowthrough (unbound) sample. The other 8 samples are also from procyclic cells. 4 samples belong to DKO(ZC3H30 gene double knockout), 2 are non-stressed and 2 are heat shocked samples; the rest 4 samples are DKO-ectopic (ZC3H30 double knockouts, expressing, ectopic copy of ZC3H30) 2 are non-stressed and 2 are heat shocked samples. Heat Shock experiment was done at 39 degree Celsius.

2017-12-16 | E-MTAB-6281 | biostudies-arrayexpress

RNAs associated with TAP-ZC3H28 in Trypanosoma brucei

Project description:RNAs associated with TAP-ZC3H28

2021-07-31 | E-MTAB-10674 | biostudies-arrayexpress