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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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RNA-seq of Heliconius melpomene adult male and female heads (eye+brain), antennae, mouthparts (labial palps+proboscis) and legs

ABSTRACT: The experiment examines expression of mRNAs in adult tissue for the purpose of identifying differentially expressed genes in each tissue. The goal of the experiment is to identify vision-related genes and their relative expression levels as quantified by FPKMs.

INSTRUMENT(S): Illumina HiSeq 2500

ORGANISM(S): Heliconius melpomene

SUBMITTER: Adriana Briscoe

PROVIDER: E-MTAB-6249 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Copy Number Variation and Expression Analysis Reveals a Nonorthologous Pinta Gene Family Member Involved in Butterfly Vision.

Macias-Muñoz Aide A McCulloch Kyle J KJ Briscoe Adriana D AD

Genome biology and evolution 20171201 12

Vertebrate (cellular retinaldehyde-binding protein) and Drosophila (prolonged depolarization afterpotential is not apparent [PINTA]) proteins with a CRAL-TRIO domain transport retinal-based chromophores that bind to opsin proteins and are necessary for phototransduction. The CRAL-TRIO domain gene family is composed of genes that encode proteins with a common N-terminal structural domain. Although there is an expansion of this gene family in Lepidoptera, there is no lepidopteran ortholog of pinta ...[more]

PMID: 29136137

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RNA-seq of adult Heliconius melpomene rosina male and female chemosensory tissues: antennae, labial palps and proboscis, and legs

Project description:The purpose of this experiment was to compare RNA-seq profiles of adult male and female butterfly chemosensory tissues to identify tissue- and sex-specific differences in gustatory and olfactory gene expression. Three biological replicates per sex were produced from individual Heliconius melpomene rosina butterflies. For the antennal libraries, both antennae were used, for the labial palps + proboscis libraries both labial palps and each proboscis was used, and for the leg libraries all six legs were used.

2014-02-14 | E-MTAB-1500 | biostudies-arrayexpress

RNA-Seq of Heliconius melpomene heads

Project description:We made RNA-Seq libraries of Heliconius melpomene heads, antennae, legs and mouth parts to identify genes upregulated in heads. We explored the expression patterns of a gene family that functions in visual pigment chromophore transport in Drosophila to identify a non-orthologous gene that has a similar function.

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RNA-Seq data for: Evolution of sex-biased gene expression and dosage compensation in the eye and brain of Heliconius butterflies

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2019-06-13 | E-MTAB-6810 | biostudies-arrayexpress

TrxA-binding proteins of Salmonella

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2023-03-11 | PXD037199 | Pride

Cathepsin K Contributes to Cavitation and Collagen Turnover in Pulmonary Tuberculosis

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Gene Expression Changes in the Development of the Soybean Seed

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2014-05-07 | E-MTAB-4045 | biostudies-arrayexpress

RRP1B is a Metastasis Modifier that Regulates the Transcriptome through mRNA Splicing

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2014-06-08 | E-GEOD-38669 | biostudies-arrayexpress

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Project description:This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

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