Nanostring profiling for immunologically relevant genes on RNA samples isolated from E. coli stimulated human FIP2 silenced macrophages

ABSTRACT: In order to investigate the importance of FIP2 on bacterially induced gene regulation, we performed a targeted transcriptome profiling for immunologically relevant genes on RNA samples isolated from E. coli stimulated human macrophages from 7 donor treated with non-targeting and FIP2 silencing siRNA. Macrophages were stimulated for up to 4h with E.coli particles, RNA isolated and analyzed using Nanostring HS_Immunology_v2_C2328 probe set. The data was analyzed in R/Bioconductor 3.4.1/3.5 with limma 3.32.5

ORGANISM(S): Homo sapiens

SUBMITTER: Korbinian Bösl 

PROVIDER: E-MTAB-6790 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress