MEF2D-HNRNPUL1 ChIP-seq in a genome-edited Kasumi-7 cell line

ABSTRACT: Acute lymphoblastic leukemia harboring the fusion genes involving the MEF2D transcription factor (MEF2D-ALL) is associated with poor clinical outcomes. To explore binding sites in the genome in MEF2D-ALL, we genome-edited a MEF2D-ALL cell line Kasumi-7 so that the fusion is tagged with HA at the carboxyl-terminal and co-expressed with GFP. We used this cell line for ChIP-seq using anti-HA antibody. Pair-end reads for Input and HA ChIP DNA are provided.

INSTRUMENT(S): Illumina HiSeq 2500

ORGANISM(S): Homo sapiens

SUBMITTER: Shinobu Tsuzuki 

PROVIDER: E-MTAB-8466 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress