Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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The transcription dynamics in Actinoplanes sp. SE50/110 during growth.


ABSTRACT: Actinoplanes sp. SE50/110 was grown in three biological replicates in fermenter cultivation in maltose minimal medium. The transcriptomic changes during growth were monitored by sampling every 24 h. RNA-seq of all 7 replicates and a pooled RNA sample of all time points of each fermenter was performed in Paired-End mode (2x 70 nt) using Illumina HiSeq. Mapping to the reference genome (GenBank: LT825010.1) was perfromed using bowtie2 Version 2.3.2.

INSTRUMENT(S): Illumina HiSeq 1500

ORGANISM(S): Actinoplanes sp. SE50/110

SUBMITTER: Julian Droste 

PROVIDER: E-MTAB-8857 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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