Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

Methanol effect on an E. coli BW25113 strain expressing heterologous mdh and das enzymes during or after growth on xylose


ABSTRACT: In this project we used the strain E. coli BW25113 ΔfrmA::frt (Δ(araD-araB)567, ΔlacZ4787(::rrnB-3), λ-, rph-1, Δ(rhaD-rhaB)568, hsdR514, ΔfrmA(::frt)) from the Keio collection (Baba et al. 2006). The plasmid {pSEVA424_mdh-das} (Low-copy-number, lacIq/Ptrc promoter, RK2 ori, SmR) from Silva-Rocha et al. 2013 was integrated in the strain to express mdh (Methanol dehydrogenase) and das (Dihydroxyacetone synthase) respectively from Acinetobacter gerneri and Pichia angusta. In this experiment, we inoculated 50 mL of M9 minimal medium with 15 mM xylose and with or without 0.15 M methanol, in baffled flasks at 30°C, 150 rpm. At D600=1 and D600=2, 12mL of each culture were centrifuged 1’30 at 14000 rpm before discarding the supernatant and freezing the pellets for 15 sec in liquid nitrogen. RNA

ORGANISM(S): Escherichia coli K-12

SUBMITTER: Brice Enjalbert 

PROVIDER: E-MTAB-8909 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress