Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of mouse early endoderm from wild type and homeobox transcription factor Cdx2 knock-out strains


ABSTRACT: We demonstrate that conditional ablation of the homeobox transcription factor Cdx2 from early endoderm results in the replacement of the posterior intestinal epithelium with keratinocytes, a dramatic cell fate conversion caused by ectopic activation of the foregut/esophageal differentiation program. This anterior homeotic transformation is first evident in the early embryonic Cdx2-deficient gut as expression of several key foregut endoderm regulators was shifted caudally. While the intestinal transcriptome was severely affected, Cdx2-deficiency only transiently modified selected posterior Hox genes and the primary enteric Hox code was maintained. Further, we demonstrate that Cdx2-directed intestinal cell fate adoption plays an important role in the establishment of normal epithelial-mesenchymal interactions, as multiple signaling pathways involved in this process were severely affected. We conclude that Cdx2 controls important aspects of intestinal identity and development, and that this function is largely independent of the enteric Hox code. Gene ablation was achieved by creating a Cdx2 loxP/loxP mouse which was then crossed with a Foxa3-CRE mouse to yield Cdx2 loxP/loxP Foxa3-CRE mice.

ORGANISM(S): Mus musculus

SUBMITTER: Nan Gao 

PROVIDER: E-MTAB-92 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Essential and redundant functions of caudal family proteins in activating adult intestinal genes.

Verzi Michael P MP   Shin Hyunjin H   Ho Li-Lun LL   Liu X Shirley XS   Shivdasani Ramesh A RA  

Molecular and cellular biology 20110314 10


Transcription factors that potently induce cell fate often remain expressed in the induced organ throughout life, but their requirements in adults are uncertain and varied. Mechanistically, it is unclear if they activate only tissue-specific genes or also directly repress heterologous genes. We conditionally inactivated mouse Cdx2, a dominant regulator of intestinal development, and mapped its genome occupancy in adult intestinal villi. Although homeotic transformation, observed in Cdx2-null emb  ...[more]

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