Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Transcription profiling of Arabidopsis colonized by a plant-growth promoting rhizobacterium


ABSTRACT: Transcriptome analysis of Arabidopsis colonized by a plant-growth promoting rhizobacterium reveals a general effect on disease resistance RNA transcript levels of Arabidopsis plants, infected by the rhizobacterium Pseudomonas thivervalensis (strain MLG45), and axenic control plants were compared using cDNA microarrays representing approximately 14 300 genes. The analysis revealed an increase of defence-related transcripts in the shoots of bacterized plants relative to control (axenic) plants. These modifications of transcript levels were confirmed by physiological experiments. Plants infected with P. thivervalensis were more resistant to subsequent infections by the virulent pathogen P. syringae pv. tomato (strain DC3000) than control plants. In addition, photosynthesis rates were repressed consistently with the reduced growth of plants colonized by P. thivervalensis. These results highlight the value of molecular phenotyping to predict physiological changes.

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Janos Demeter 

PROVIDER: E-SMDB-2344 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Transcriptome analysis of Arabidopsis colonized by a plant-growth promoting rhizobacterium reveals a general effect on disease resistance.

Cartieaux Fabienne F   Thibaud Marie-Christine MC   Zimmerli Laurent L   Lessard Philippe P   Sarrobert Catherine C   David Pascale P   Gerbaud Alain A   Robaglia Christophe C   Somerville Shauna S   Nussaume Laurent L  

The Plant journal : for cell and molecular biology 20031001 2


RNA transcript levels of Arabidopsis plants, infected by the rhizobacterium Pseudomonas thivervalensis (strain MLG45), and axenic control plants were compared using cDNA microarrays representing approximately 14 300 genes. The analysis revealed an increase of defence-related transcripts in the shoots of bacterized plants relative to control (axenic) plants. These modifications of transcript levels were confirmed by physiological experiments. Plants infected with P. thivervalensis were more resis  ...[more]

Similar Datasets

2005-12-21 | GSE3885 | GEO
2005-12-20 | E-GEOD-3885 | biostudies-arrayexpress
2016-06-05 | E-MTAB-4683 | biostudies-arrayexpress
2010-11-19 | GSE16434 | GEO
2010-11-19 | E-GEOD-16434 | biostudies-arrayexpress
2012-07-19 | E-GEOD-39536 | biostudies-arrayexpress
2023-07-19 | GSE218962 | GEO
2012-07-20 | GSE39536 | GEO
2023-07-19 | GSE218961 | GEO
2017-01-12 | GSE90075 | GEO