Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Chromatin immunoprecipitation of transcription factor Dpf3 in mouse myoblast cells (C2C12) to identify genome wide binding sites


ABSTRACT: The aim of the experiment was to identify genome wide binding sites for the transcription factor Dpf3 by using Chromatin Immunoprecipitation followed by microarray analysis (ChIP-chip) in C2C12 cells.

ORGANISM(S): Mus musculus

SUBMITTER: Silke Sperling 

PROVIDER: E-TABM-362 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications


Chromatin remodeling and histone modifications facilitate access of transcription factors to DNA by promoting the unwinding and destabilization of histone-DNA interactions. We present DPF3, a new epigenetic key factor for heart and muscle development characterized by a double PHD finger. DPF3 is associated with the BAF chromatin remodeling complex and binds methylated and acetylated lysine residues of histone 3 and 4. Thus, DPF3 may represent the first plant homeodomains that bind acetylated lys  ...[more]

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