Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Chromatin immunoprecipitation of p53 in human osteocarcoma cells


ABSTRACT: Genome-wide identification of p53 binding sites by ChIP-on-chip using Nimblegen tiling arrays

ORGANISM(S): Homo sapiens

SUBMITTER: Simon van Heeringen 

PROVIDER: E-TABM-442 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Characterization of genome-wide p53-binding sites upon stress response.

Smeenk Leonie L   van Heeringen Simon J SJ   Koeppel Max M   van Driel Marc A MA   Bartels Stefanie J J SJ   Akkers Robert C RC   Denissov Sergei S   Stunnenberg Hendrik G HG   Lohrum Marion M  

Nucleic acids research 20080512 11


The tumor suppressor p53 is a sequence-specific transcription factor, which regulates the expression of target genes involved in different stress responses. To understand p53's essential transcriptional functions, unbiased analysis of its DNA-binding repertoire is pivotal. In a genome-wide tiling ChIP-on-chip approach, we have identified and characterized 1546 binding sites of p53 upon Actinomycin D treatment. Among those binding sites were known as well as novel p53 target sites, which included  ...[more]

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