ProFeatMap: a highly customizable tool for 2D feature representation of protein sets

ABSTRACT: Abstract

Motivation

Studies of sets of proteins are a central point in biology. In particular, the application of omics in the last decades has generated lists of several hundreds or thousands of proteins or genes. However, these lists are often not inspected globally, possibly due to the lack of tools capable of simultaneously visualizing the feature architectures of a large number of proteins.

Results

Here, we present ProFeatMap, an intuitive Python-based website. For a given set of proteins, it allows to display features such as domains, repeats, disorder or post-translational modifications and their organization along the sequences, into a highly customizable 2D map. Starting from a user-defined protein list of UniProt accession codes, ProFeatMap extracts the most imp

SUBMITTER:  

PROVIDER: S-EPMC10023195 | biostudies-literature | 2023 Jan

REPOSITORIES: biostudies-literature