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Architecture of the outbred brown fat proteome defines regulators of metabolic physiology.


ABSTRACT: Brown adipose tissue (BAT) regulates metabolic physiology. However, nearly all mechanistic studies of BAT protein function occur in a single inbred mouse strain, which has limited the understanding of generalizable mechanisms of BAT regulation over physiology. Here, we perform deep quantitative proteomics of BAT across a cohort of 163 genetically defined diversity outbred mice, a model that parallels the genetic and phenotypic variation found in humans. We leverage this diversity to define the functional architecture of the outbred BAT proteome, comprising 10,479 proteins. We assign co-operative functions to 2,578 proteins, enabling systematic discovery of regulators of BAT. We also identify 638 proteins that correlate with protection from, or sensitivity to, at least one parameter of metabolic disease. We use these findings to uncover SFXN5, LETMD1, and ATP1A2 as modulators of BAT thermogenesis or adiposity, and provide OPABAT as a resource for understanding the conserved mechanisms of BAT regulation over metabolic physiology.

SUBMITTER: Xiao H 

PROVIDER: S-EPMC10040263 | biostudies-literature | 2022 Nov

REPOSITORIES: biostudies-literature

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Architecture of the outbred brown fat proteome defines regulators of metabolic physiology.

Xiao Haopeng H   Bozi Luiz H M LHM   Sun Yizhi Y   Riley Christopher L CL   Philip Vivek M VM   Chen Mandy M   Li Jiaming J   Zhang Tian T   Mills Evanna L EL   Emont Margo P MP   Sun Wenfei W   Reddy Anita A   Garrity Ryan R   Long Jiani J   Becher Tobias T   Vitas Laura Potano LP   Laznik-Bogoslavski Dina D   Ordonez Martha M   Liu Xinyue X   Chen Xiong X   Wang Yun Y   Liu Weihai W   Tran Nhien N   Liu Yitong Y   Zhang Yang Y   Cypess Aaron M AM   White Andrew P AP   He Yuchen Y   Deng Rebecca R   Schöder Heiko H   Paulo Joao A JA   Jedrychowski Mark P MP   Banks Alexander S AS   Tseng Yu-Hua YH   Cohen Paul P   Tsai Linus T LT   Rosen Evan D ED   Klein Samuel S   Chondronikola Maria M   McAllister Fiona E FE   Van Bruggen Nick N   Huttlin Edward L EL   Spiegelman Bruce M BM   Churchill Gary A GA   Gygi Steven P SP   Chouchani Edward T ET  

Cell 20221104 24


Brown adipose tissue (BAT) regulates metabolic physiology. However, nearly all mechanistic studies of BAT protein function occur in a single inbred mouse strain, which has limited the understanding of generalizable mechanisms of BAT regulation over physiology. Here, we perform deep quantitative proteomics of BAT across a cohort of 163 genetically defined diversity outbred mice, a model that parallels the genetic and phenotypic variation found in humans. We leverage this diversity to define the f  ...[more]

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