Unknown

Dataset Information

0

Deep texture representation analysis for histopathological images.


ABSTRACT: Deep texture representations (DTRs) produced from a bilinear convolutional neural network allow objective quantification of tumor histopathology images effectively. They can be used for various analyses, including visualization of morphological correlation between histology images, content-based image retrieval (CBIR), and supervised learning. This protocol describes the simplified workflow to analyze DTRs from data preparation, visualization of the histological profile, and CBIR analysis, to supervised learning model development to predict the profile from histological images. For complete details on the use and execution of this protocol, please refer to Komura et al. (2022).1.

SUBMITTER: Herdiantoputri RR 

PROVIDER: S-EPMC10074187 | biostudies-literature | 2023 Mar

REPOSITORIES: biostudies-literature

altmetric image

Publications

Deep texture representation analysis for histopathological images.

Herdiantoputri Ranny Rahaningrum RR   Komura Daisuke D   Fujisaka Kei K   Ikeda Tohru T   Ishikawa Shumpei S  

STAR protocols 20230323 2


Deep texture representations (DTRs) produced from a bilinear convolutional neural network allow objective quantification of tumor histopathology images effectively. They can be used for various analyses, including visualization of morphological correlation between histology images, content-based image retrieval (CBIR), and supervised learning. This protocol describes the simplified workflow to analyze DTRs from data preparation, visualization of the histological profile, and CBIR analysis, to su  ...[more]

Similar Datasets

| S-EPMC6390493 | biostudies-literature
| S-EPMC9270329 | biostudies-literature
| S-EPMC9945212 | biostudies-literature
| S-EPMC8156071 | biostudies-literature
| S-EPMC10123069 | biostudies-literature
| S-EPMC9213738 | biostudies-literature
| S-EPMC9170952 | biostudies-literature
| S-EPMC9576982 | biostudies-literature
| S-EPMC7156509 | biostudies-literature