RNAlysis: analyze your RNA sequencing data without writing a single line of code.

ABSTRACT: Among the major challenges in next-generation sequencing experiments are exploratory data analysis, interpreting trends, identifying potential targets/candidates, and visualizing the results clearly and intuitively. These hurdles are further heightened for researchers who are not experienced in writing computer code since most available analysis tools require programming skills. Even for proficient computational biologists, an efficient and replicable system is warranted to generate standardized results. We have developed RNAlysis, a modular Python-based analysis software for RNA sequencing data. RNAlysis allows users to build customized analysis pipelines suiting their specific research questions, going all the way from raw FASTQ files (adapter trimming, alignment, and feature counting),

SUBMITTER: Teichman G 

PROVIDER: S-EPMC10080885 | biostudies-literature | 2023 Apr

REPOSITORIES: biostudies-literature