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Effects of fine grinding on mid-infrared spectroscopic analysis of plant leaf nutrient content.

ABSTRACT: Fourier transform mid infrared (FT-MIR) spectroscopy combined with modeling techniques has been studied as a useful tool for multivariate chemical analysis in agricultural research. A drawback of this method is the sample preparation requirement, in which samples must be dried and fine ground for accurate model calibrations. For research involving large sample sets, this may dramatically increase the time and cost of analysis. This study investigates the effect of fine grinding on model performance using leaf tissue from a variety of crop species. Dried leaf samples (N = 300) from various environmental conditions were obtained with data on 11 nutrients measured using chemical methods. The samples were scanned with attenuated total reflectance (ATR) and diffuse reflectance (DRIFT) FT-MIR techniques. Scanning was repeated after fine grinding for 2, 5, and 10 min. The spectra were analyzed for the 11 nutrients using partial least squares regression with a 75%/25% split for calibration and validation and repeated for 50 iterations. All analytes except for boron, iron, and zinc were well-modeled (average R² > 0.7), with higher R² values on ATR spectra. The 5 min level of fine grinding was found to be most optimal considering overall model performance and sample preparation time.

SUBMITTER: Whatley CR

PROVIDER: S-EPMC10113243 | biostudies-literature | 2023 Apr

REPOSITORIES: biostudies-literature

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Effects of fine grinding on mid-infrared spectroscopic analysis of plant leaf nutrient content.

Whatley Caleb R CR Wijewardane Nuwan K NK Bheemanahalli Raju R Reddy K Raja KR Lu Yuzhen Y

Scientific reports 20230418 1

Fourier transform mid infrared (FT-MIR) spectroscopy combined with modeling techniques has been studied as a useful tool for multivariate chemical analysis in agricultural research. A drawback of this method is the sample preparation requirement, in which samples must be dried and fine ground for accurate model calibrations. For research involving large sample sets, this may dramatically increase the time and cost of analysis. This study investigates the effect of fine grinding on model performa ...[more]

PMID: 37072478

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Project description:The nitrogen content of apple leaves and jujube leaves is an important index to judge the growth and development of apple trees and jujube trees to a certain extent. The prediction performance of the two samples was compared between different models for leaf nitrogen content, respectively. The near-infrared absorption spectra of 287 apple leaf samples and 192 jujube leaf samples were collected. After eliminating the outliers by Mahalanobis distance method, the remaining spectral data were processed by six different preprocessing methods. BP neural network (BP), random forest regression (RF), least partial squares (PLS), K-Nearest Neighbor (KNN), and support vector regression (SVR) were compared to establish prediction models of nitrogen content in apple leaves and jujube leaves. The results showed that the determination coefficient (R2), root mean square error (RMSE) and residual prediction deviation (RPD) of the models established by different combined pretreatment methods were compared among the five methods. Compared with the performance of the other four models, the modeling method of SG + SD + CARS + RF was suitable for the prediction of nitrogen content in apple leaves, and its modeling set R2 was 0.85408, RMSE was 0.082188, and RPD was 2.5864. The validation set R2 is 0.75527, RMSE is 0.099028, RPD is 2.1956. The modeling method of FD + CARS + PLS was suitable for the prediction of nitrogen content in jujube leaves. The modeling set R2 was 0.7954, RMSE was 0.14558, and RPD was 2.4264; the validation set R2 is 0.81348, RMSE is 0.089217, and RPD is 2.4552.In the prediction modeling of apple leaf nitrogen content in the characteristic band, the model quality of RF was better than the other four prediction models. The model quality of PLS in predictive modeling of nitrogen content of jujube leaves in characteristic bands is superior to the other four predictive models, These results provide a reference for the use of near-infrared spectroscopy to determine whether apple trees and jujube trees are deficient in nutrients.

Dataset Information

Effects of fine grinding on mid-infrared spectroscopic analysis of plant leaf nutrient content.

Publications

Effects of fine grinding on mid-infrared spectroscopic analysis of plant leaf nutrient content.

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