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Cross-modal autoencoder framework learns holistic representations of cardiovascular state.


ABSTRACT: A fundamental challenge in diagnostics is integrating multiple modalities to develop a joint characterization of physiological state. Using the heart as a model system, we develop a cross-modal autoencoder framework for integrating distinct data modalities and constructing a holistic representation of cardiovascular state. In particular, we use our framework to construct such cross-modal representations from cardiac magnetic resonance images (MRIs), containing structural information, and electrocardiograms (ECGs), containing myoelectric information. We leverage the learned cross-modal representation to (1) improve phenotype prediction from a single, accessible phenotype such as ECGs; (2) enable imputation of hard-to-acquire cardiac MRIs from easy-to-acquire ECGs; and (3) develop a framework for performing genome-wide association studies in an unsupervised manner. Our results systematically integrate distinct diagnostic modalities into a common representation that better characterizes physiologic state.

SUBMITTER: Radhakrishnan A 

PROVIDER: S-EPMC10140057 | biostudies-literature | 2023 Apr

REPOSITORIES: biostudies-literature

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Cross-modal autoencoder framework learns holistic representations of cardiovascular state.

Radhakrishnan Adityanarayanan A   Friedman Sam F SF   Khurshid Shaan S   Ng Kenney K   Batra Puneet P   Lubitz Steven A SA   Philippakis Anthony A AA   Uhler Caroline C  

Nature communications 20230428 1


A fundamental challenge in diagnostics is integrating multiple modalities to develop a joint characterization of physiological state. Using the heart as a model system, we develop a cross-modal autoencoder framework for integrating distinct data modalities and constructing a holistic representation of cardiovascular state. In particular, we use our framework to construct such cross-modal representations from cardiac magnetic resonance images (MRIs), containing structural information, and electro  ...[more]

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