Clarion is a multi-label problem transformation method for identifying mRNA subcellular localizations.

ABSTRACT: Subcellular localization of messenger RNAs (mRNAs) plays a key role in the spatial regulation of gene activity. The functions of mRNAs have been shown to be closely linked with their localizations. As such, understanding of the subcellular localizations of mRNAs can help elucidate gene regulatory networks. Despite several computational methods that have been developed to predict mRNA localizations within cells, there is still much room for improvement in predictive performance, especially for the multiple-location prediction. In this study, we proposed a novel multi-label multi-class predictor, termed Clarion, for mRNA subcellular localization prediction. Clarion was developed based on a manually curated benchmark dataset and leveraged the weighted series method for multi-label transformat

SUBMITTER: Bi Y 

PROVIDER: S-EPMC10148739 | biostudies-literature | 2022 Nov

REPOSITORIES: biostudies-literature