Dataset Information

RbcL-based dataset on intra-specific diversity and conservation of Adansonia digitata L. (Malvaceae) in the savannah belt of Nigeria.

ABSTRACT: The African baobab species belong to the family Malvaceae and the genus Adansonia. The disjointed tree thrives in arid or semi-arid regions, is native to the thorn woodlands of Africa, along tracks, and is associated with human-populated forest areas. It is considered indigenous to Central and West Africa and has been introduced to the Arabian Peninsula, South-East Asia, the Indian sub-continent, and the Caribbeans. Adansonia digitata is a multifunctional tree with a long lifespan of over 1000 years old. The leaves, roots, flowers, fruit pulp, seeds and barks are used for food, medicine, or other ethnic-practices. The utilisation level and distribution are significantly undermined by climate change and poor use practices. The data set offers insight into the distribution pattern and genetic diversity of Adansonia digitata across the savannah belt of Nigeria using the rbcL gene.

SUBMITTER: Omonhinmin CA

PROVIDER: S-EPMC10160342 | biostudies-literature | 2023 Jun

REPOSITORIES: biostudies-literature

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rbcL-based dataset on intra-specific diversity and conservation of Adansonia digitata L. (Malvaceae) in the savannah belt of Nigeria.

Omonhinmin Conrad Asotie CA Piwuna Panrot Peace PP Aderanti Miracle Omolara MO Bolade Abimbola Odunayo AO

Data in brief 20230407

The African baobab species belong to the family Malvaceae and the genus Adansonia. The disjointed tree thrives in arid or semi-arid regions, is native to the thorn woodlands of Africa, along tracks, and is associated with human-populated forest areas. It is considered indigenous to Central and West Africa and has been introduced to the Arabian Peninsula, South-East Asia, the Indian sub-continent, and the Caribbeans. Adansonia digitata is a multifunctional tree with a long lifespan ...[more]

PMID: 37153122

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Project description:Background and aimsAdansonia comprises nine species, six of which are endemic to Madagascar. Genetic relationships between the Malagasy species remain unresolved due to conflicting results between nuclear and plastid DNA variation. Morphologically intermediate individuals between distinct species have been identified, indicative of interspecific hybridization. In this paper, microsatellite data are used to identify potential cases of hybridization and to provide insights into the evolutionary history of the genus on Madagascar.MethodsEleven microsatellites amplified with new primers developed for Adansonia rubrostipa were used to analyse 672 individuals collected at 27 sites for the six Malagasy species and morphologically intermediate individuals. Rates of individual admixture were examined using three Bayesian clustering programs, STRUCTURE, BAPS and NewHybrids, with no a priori species assignment.Key resultsPopulation differentiation was coherent, with recognized species boundaries. In the four Malagasy species of section Longitubae, 8·0, 9·0 and 9·5 % of individuals with mixed genotypes were identified by BAPS, NewHybrids and STRUCTURE, respectively. At sites with sympatric populations of A. rubrostipa and A. za, NewHybrids indicated these individuals to be F2 and, predominantly, backcrosses with both parental species. In northern Madagascar, two populations of trees combining A. za and A. perrieri morphology and microsatellite alleles were identified in the current absence of the parental species.ConclusionsThe clear genetic differentiation observed between the six species may reflect their adaptation to different assortments of climate regimes and habitats during the colonization of the island. Microsatellite variation reveals that hybridization probably occurred in secondary contact between species of section Longitubae. This type of hybridization may also have been involved in the differentiation of a local new stabilized entity showing specific microsatellite alleles and morphological characters, suggesting a potential role of hybridization in the recent history of diversification on Madagascar.

Dataset Information

RbcL-based dataset on intra-specific diversity and conservation of Adansonia digitata L. (Malvaceae) in the savannah belt of Nigeria.

Publications

rbcL-based dataset on intra-specific diversity and conservation of <i>Adansonia digitata</i> L. (Malvaceae) in the savannah belt of Nigeria.

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