Whole genome sequencing and analysis of Armillaria gallica Jzi34 symbiotic with Gastrodia elata.

ABSTRACT:

Background

Armillaria species are plant pathogens, but a few Armillaria species can establish a symbiotic relationship with Gastrodia elata, a rootless and leafless orchid, that is used as a Chinese herbal medicine. Armillaria is a nutrient source for the growth of G. elata. However, there are few reports on the molecular mechanism of symbiosis between Armillaria species and G. elata. The genome sequencing and analysis of Armillaria symbiotic with G. elata would provide genomic information for further studying the molecular mechanism of symbiosis.

Results

The de novo genome assembly was performed with the PacBio Sequel platform and Illumina NovaSeq PE150 for the A. gallica Jzi34 strain, which was symbiotic with G. elata. Its genome assembly contained ~ 79.9 Mbp and consisted

SUBMITTER: Cai J 

PROVIDER: S-EPMC10204328 | biostudies-literature | 2023 May

REPOSITORIES: biostudies-literature