Sequence Coverage Visualizer: A Web Application for Protein Sequence Coverage 3D Visualization.

ABSTRACT: Protein structure defines protein function and plays an extremely important role in protein characterization. Recently, two groups of researchers from DeepMind and the Baker lab have independently published protein structure prediction tools that can help us obtain predicted protein structures for the whole human proteome. This enabled us to visualize the entire human proteome using predicted 3D structures for the first time. To help other researchers best utilize these protein structure predictions in proteomics experiments, we present the Sequence Coverage Visualizer (SCV), http://scv.lab.gy, a web application for protein sequence coverage 3D visualization. Here we showed a few possible usages of the SCV, including the labeling of post-translational modifications and isotope labeling exp

SUBMITTER: Shao X 

PROVIDER: S-EPMC10232130 | biostudies-literature | 2023 Feb

REPOSITORIES: biostudies-literature