Tidyproteomics: an open-source R package and data object for quantitative proteomics post analysis and visualization.

ABSTRACT:

Background

The analysis of mass spectrometry-based quantitative proteomics data can be challenging given the variety of established analysis platforms, the differences in reporting formats, and a general lack of approachable standardized post-processing analyses such as sample group statistics, quantitative variation and even data filtering. We developed tidyproteomics to facilitate basic analysis, improve data interoperability and potentially ease the integration of new processing algorithms, mainly through the use of a simplified data-object.

Results

The R package tidyproteomics was developed as both a framework for standardizing quantitative proteomics data and a platform for analysis workflows, containing discrete functions that can be connected end-to-end, thus making i

SUBMITTER: Jones J 

PROVIDER: S-EPMC10246047 | biostudies-literature | 2023 Jun

REPOSITORIES: biostudies-literature