Unknown

Dataset Information

0

ISort enables automated complex microfluidic droplet sorting in an effort to democratize technology.


ABSTRACT: Fluorescence-activated droplet sorting (FADS) is a widely used microfluidic technique for high-throughput screening. However, it requires highly trained specialists to determine optimal sorting parameters, and this results in a large combinatorial space that is challenging to optimize systematically. Additionally, it is currently challenging to track every single droplet within a screen, leading to compromised sorting and "hidden" false-positive events. To overcome these limitations, we have developed a setup in which the droplet frequency, spacing, and trajectory at the sorting junction are monitored in real time using impedance analysis. The resulting data are used to continuously optimize all parameters automatically and to counteract perturbations, resulting in higher throughput, higher reproducibility, increased robustness, and a beginner-friendly character. We believe this provides a missing piece for the spreading of phenotypic single-cell analysis methods, similar to what we have seen for single-cell genomics platforms.

SUBMITTER: Panwar J 

PROVIDER: S-EPMC10261925 | biostudies-literature | 2023 May

REPOSITORIES: biostudies-literature

altmetric image

Publications

iSort enables automated complex microfluidic droplet sorting in an effort to democratize technology.

Panwar Jatin J   Utharala Ramesh R   Fennelly Laura L   Frenzel Daniel D   Merten Christoph A CA  

Cell reports methods 20230512 5


Fluorescence-activated droplet sorting (FADS) is a widely used microfluidic technique for high-throughput screening. However, it requires highly trained specialists to determine optimal sorting parameters, and this results in a large combinatorial space that is challenging to optimize systematically. Additionally, it is currently challenging to track every single droplet within a screen, leading to compromised sorting and "hidden" false-positive events. To overcome these limitations, we have dev  ...[more]

Similar Datasets

| S-EPMC6190479 | biostudies-literature
| S-EPMC8748334 | biostudies-literature
| S-EPMC7782806 | biostudies-literature
| S-EPMC4831006 | biostudies-literature
| S-EPMC6190347 | biostudies-literature
| S-EPMC6493727 | biostudies-literature
| S-EPMC5882410 | biostudies-literature