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Transcriptome profiling of the initial segment and proximal caput of mouse epididymis.


ABSTRACT:

Background

The proximal region of the mouse epididymis plays a pivotal role in sperm transport, sperm maturation, and male fertility. Several studies have focused on segment-dependent gene expression of the mouse epididymis through high-throughput sequencing without the precision of the microdissection.

Methods and results

Herein, we isolated the initial segment (IS) and proximal caput (P-caput) by physical microdissection using an Lcn9-cre; Rosa26tdTomato mouse model. We defined the transcriptome changes of caput epididymis by RNA sequencing (RNA-seq), which identified 1,961 genes that were abundantly expressed in the IS and 1,739 genes that were prominently expressed in the P-caput. In addition, we found that many differentially expressed genes (DEGs) were predominantly or uniquely expressed in the epididymis and region-specific genes were highly associated with transport, secretion, sperm motility, fertilization, and male fertility.

Conclusion

Thus, this study provides an RNA-seq resource to identify region-specific genes in the caput epididymis. The epididymal-selective/specific genes are potential targets for male contraception and may provide new insights into understanding segment-specific epididymal microenvironment-mediated sperm transport, maturation, and male fertility.

SUBMITTER: Wang X 

PROVIDER: S-EPMC10266198 | biostudies-literature | 2023

REPOSITORIES: biostudies-literature

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Transcriptome profiling of the initial segment and proximal caput of mouse epididymis.

Wang Xiao X   Qiu Fanyi F   Yu Junjie J   Zhou Meiyang M   Zuo Anjian A   Xu Xiaojiang X   Sun Xiao-Yang XY   Wang Zhengpin Z  

Frontiers in endocrinology 20230531


<h4>Background</h4>The proximal region of the mouse epididymis plays a pivotal role in sperm transport, sperm maturation, and male fertility. Several studies have focused on segment-dependent gene expression of the mouse epididymis through high-throughput sequencing without the precision of the microdissection.<h4>Methods and results</h4>Herein, we isolated the initial segment (IS) and proximal caput (P-caput) by physical microdissection using an <i>Lcn9</i>-<i>cre</i>; <i>Rosa26<sup>tdTomato</s  ...[more]

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