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Rare coding variants in CHRNB2 reduce the likelihood of smoking.


ABSTRACT: Human genetic studies of smoking behavior have been thus far largely limited to common variants. Studying rare coding variants has the potential to identify drug targets. We performed an exome-wide association study of smoking phenotypes in up to 749,459 individuals and discovered a protective association in CHRNB2, encoding the β2 subunit of the α4β2 nicotine acetylcholine receptor. Rare predicted loss-of-function and likely deleterious missense variants in CHRNB2 in aggregate were associated with a 35% decreased odds for smoking heavily (odds ratio (OR) = 0.65, confidence interval (CI) = 0.56-0.76, P = 1.9 × 10-8). An independent common variant association in the protective direction ( rs2072659 ; OR = 0.96; CI = 0.94-0.98; P = 5.3 × 10-6) was also evident, suggesting an allelic series. Our findings in humans align with decades-old experimental observations in mice that β2 loss abolishes nicotine-mediated neuronal responses and attenuates nicotine self-administration. Our genetic discovery will inspire future drug designs targeting CHRNB2 in the brain for the treatment of nicotine addiction.

SUBMITTER: Rajagopal VM 

PROVIDER: S-EPMC10335934 | biostudies-literature | 2023 Jul

REPOSITORIES: biostudies-literature

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Rare coding variants in CHRNB2 reduce the likelihood of smoking.

Rajagopal Veera M VM   Watanabe Kyoko K   Mbatchou Joelle J   Ayer Ariane A   Quon Peter P   Sharma Deepika D   Kessler Michael D MD   Praveen Kavita K   Gelfman Sahar S   Parikshak Neelroop N   Otto Jacqueline M JM   Bao Suying S   Chim Shek Man SM   Pavlopoulos Elias E   Avbersek Andreja A   Kapoor Manav M   Chen Esteban E   Jones Marcus B MB   Leblanc Michelle M   Emberson Jonathan J   Collins Rory R   Torres Jason J   Morales Pablo Kuri PK   Tapia-Conyer Roberto R   Alegre Jesus J   Berumen Jaime J   Shuldiner Alan R AR   Balasubramanian Suganthi S   Abecasis Gonçalo R GR   Kang Hyun M HM   Marchini Jonathan J   Stahl Eli A EA   Jorgenson Eric E   Sanchez Robert R   Liedtke Wolfgang W   Anderson Matthew M   Cantor Michael M   Lederer David D   Baras Aris A   Coppola Giovanni G  

Nature genetics 20230612 7


Human genetic studies of smoking behavior have been thus far largely limited to common variants. Studying rare coding variants has the potential to identify drug targets. We performed an exome-wide association study of smoking phenotypes in up to 749,459 individuals and discovered a protective association in CHRNB2, encoding the β2 subunit of the α4β2 nicotine acetylcholine receptor. Rare predicted loss-of-function and likely deleterious missense variants in CHRNB2 in aggregate were associated w  ...[more]

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