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A super-enhancer-regulated RNA-binding protein cascade drives pancreatic cancer.


ABSTRACT: Pancreatic ductal adenocarcinoma (PDAC) is a lethal malignancy in need of new therapeutic options. Using unbiased analyses of super-enhancers (SEs) as sentinels of core genes involved in cell-specific function, here we uncover a druggable SE-mediated RNA-binding protein (RBP) cascade that supports PDAC growth through enhanced mRNA translation. This cascade is driven by a SE associated with the RBP heterogeneous nuclear ribonucleoprotein F, which stabilizes protein arginine methyltransferase 1 (PRMT1) to, in turn, control the translational mediator ubiquitin-associated protein 2-like. All three of these genes and the regulatory SE are essential for PDAC growth and coordinately regulated by the Myc oncogene. In line with this, modulation of the RBP network by PRMT1 inhibition reveals a unique vulnerability in Myc-high PDAC patient organoids and markedly reduces tumor growth in male mice. Our study highlights a functional link between epigenetic regulation and mRNA translation and identifies components that comprise unexpected therapeutic targets for PDAC.

SUBMITTER: Antal CE 

PROVIDER: S-EPMC10482938 | biostudies-literature | 2023 Sep

REPOSITORIES: biostudies-literature

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A super-enhancer-regulated RNA-binding protein cascade drives pancreatic cancer.

Antal Corina E CE   Oh Tae Gyu TG   Aigner Stefan S   Luo En-Ching EC   Yee Brian A BA   Campos Tania T   Tiriac Hervé H   Rothamel Katherine L KL   Cheng Zhang Z   Jiao Henry H   Wang Allen A   Hah Nasun N   Lenkiewicz Elizabeth E   Lumibao Jan C JC   Truitt Morgan L ML   Estepa Gabriela G   Banayo Ester E   Bashi Senada S   Esparza Edgar E   Munoz Ruben M RM   Diedrich Jolene K JK   Sodir Nicole M NM   Mueller Jasmine R JR   Fraser Cory R CR   Borazanci Erkut E   Propper David D   Von Hoff Daniel D DD   Liddle Christopher C   Yu Ruth T RT   Atkins Annette R AR   Han Haiyong H   Lowy Andrew M AM   Barrett Michael T MT   Engle Dannielle D DD   Evan Gerard I GI   Yeo Gene W GW   Downes Michael M   Evans Ronald M RM  

Nature communications 20230906 1


Pancreatic ductal adenocarcinoma (PDAC) is a lethal malignancy in need of new therapeutic options. Using unbiased analyses of super-enhancers (SEs) as sentinels of core genes involved in cell-specific function, here we uncover a druggable SE-mediated RNA-binding protein (RBP) cascade that supports PDAC growth through enhanced mRNA translation. This cascade is driven by a SE associated with the RBP heterogeneous nuclear ribonucleoprotein F, which stabilizes protein arginine methyltransferase 1 (P  ...[more]

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