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Whole genomes from bacteria collected at diagnostic units around the world 2020.


ABSTRACT: The Two Weeks in the World research project has resulted in a dataset of 3087 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units in 35 countries around the world during 2020. A relational database is available with metadata and summary data from selected bioinformatic analysis, such as species prediction and identification of acquired resistance genes.

SUBMITTER: Nag S 

PROVIDER: S-EPMC10505216 | biostudies-literature | 2023 Sep

REPOSITORIES: biostudies-literature

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Whole genomes from bacteria collected at diagnostic units around the world 2020.

Nag Sidsel S   Larsen Gunhild G   Szarvas Judit J   Birkedahl Laura Elmlund Kohl LEK   Gulyás Gábor Máté GM   Ciok Wojchiech Jakub WJ   Lagermann Timmie Mikkel TM   Tafaj Silva S   Bradbury Susan S   Collignon Peter P   Daley Denise D   Dougnon Victorien V   Fabiyi Kafayath K   Coulibaly Boubacar B   Dembélé René R   Nikiema Georgette G   Magloire Natama N   Ouindgueta Isidore Juste IJ   Hossain Zenat Zebin ZZ   Begum Anowara A   Donchev Deyan D   Diggle Mathew M   Turnbull LeeAnn L   Lévesque Simon S   Berlinger Livia L   Sogaard Kirstine Kobberoe KK   Guevara Paula Diaz PD   Valderrama Carolina Duarte CD   Maikanti Panagiota P   Amlerova Jana J   Drevinek Pavel P   Tkadlec Jan J   Dilas Milica M   Kaasch Achim A   Westh Henrik Torkil HT   Bachtarzi Mohamed Azzedine MA   Amhis Wahiba W   Salazar Carolina Elisabeth Satán CES   Villacis JoséEduardo J   Lúzon Mária Angeles Dominguez MAD   Palau Dámaris Berbel DB   Duployez Claire C   Paluche Maxime M   Asante-Sefa Solomon S   Moller Mie M   Ip Margaret M   Mareković Ivana I   Pál-Sonnevend Agnes A   Cocuzza Clementiza Elvezia CE   Dambrauskiene Asta A   Macanze Alexandre A   Cossa Anelsio A   Mandomando Inácio I   Nwajiobi-Princewill Philip P   Okeke Iruka N IN   Kehinde Aderemi O AO   Adebiyi Ini I   Akintayo Ifeoluwa I   Popoola Oluwafemi O   Onipede Anthony A   Blomfeldt Anita A   Nyquist Nora Elisabeth NE   Bocker Kiri K   Ussher James J   Ali Amjad A   Ullah Nimat N   Khan Habibullah H   Gustafson Natalie Weiler NW   Jarrar Ikhlas I   Al-Hamad Arif A   Luvira Viravarn V   Paveenkittiporn Wantana W   Baran Irmak I   Mwansa James C L JCL   Sikakwa Linda L   Yamba Kaunda K   Hendriksen Rene Sjogren RS   Aarestrup Frank Moller FM  

Scientific data 20230916 1


The Two Weeks in the World research project has resulted in a dataset of 3087 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units in 35 countries around the world during 2020. A relational database is available with metadata and summary data from selected bioinformatic analysis, such as species prediction and identification of acquired resistance genes. ...[more]

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