Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

The genome sequence of the Large Scabious Mining Bee, Andrena hattorfiana (Fabricius, 1775).

ABSTRACT: We present a genome assembly from an individual female Andrena hattorfiana (the Large Scabious Mining Bee; Arthropoda; Insecta; Hymenoptera; Andrenidae). The genome sequence is 428.5 megabases in span. Most of the assembly is scaffolded into seven chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 22.7 kilobases in length. Gene annotation of this assembly on Ensembl identified 11,349 protein coding genes.

SUBMITTER: Falk S

PROVIDER: S-EPMC10511852 | biostudies-literature | 2023

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

The genome sequence of the Large Scabious Mining Bee, Andrena hattorfiana (Fabricius, 1775).

Falk Steven S Tan Kar-Tong KT

Wellcome open research 20230518

We present a genome assembly from an individual female Andrena hattorfiana (the Large Scabious Mining Bee; Arthropoda; Insecta; Hymenoptera; Andrenidae). The genome sequence is 428.5 megabases in span. Most of the assembly is scaffolded into seven chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 22.7 kilobases in length. Gene annotation of this assembly on Ensembl identified 11,349 protein coding genes. ...[more]

PMID: 37744731

Similar Datasets

The genome sequence of the Sulphur Tubic, Esperia sulphurella (Fabricius, 1775).

Project description:We present a genome assembly from an individual male Esperia sulphurella (the Sulphur Tubic; Arthropoda; Insecta; Lepidoptera; Oecophoridae). The genome sequence is 453.2 megabases in span. Most of the assembly is scaffolded into 30 chromosomal pseudomolecules, including the assembled Z sex chromosome. The mitochondrial genome has also been assembled and is 16.2 kilobases in length.

| S-EPMC10690030 | biostudies-literature

The genome sequence of the Ingrailed Clay, Diarsia mendica (Fabricius, 1775).

Project description:We present a genome assembly from an individual male Diarsia mendica (the Ingrailed Clay; Arthropoda; Insecta; Lepidoptera; Noctuidae). The genome sequence is 727.9 megabases in span. Most of the assembly is scaffolded into 32 chromosomal pseudomolecules, including the Z sex chromosome. The mitochondrial genome has also been assembled and is 15.37 kilobases in length. Gene annotation of this assembly on Ensembl identified 14,077 protein coding genes.

| S-EPMC10850848 | biostudies-literature

The genome sequence of a ground beetle, Leistus spinibarbis (Fabricius, 1775).

Project description:We present a genome assembly from an individual male Leistus spinibarbis (a ground beetle; Arthropoda; Insecta; Coleoptera; Carabidae). The genome sequence is 235.1 megabases in span. Most of the assembly is scaffolded into 23 chromosomal pseudomolecules, including the X sex chromosome. The mitochondrial genome has also been assembled and is 15.82 kilobases in length. Gene annotation of this assembly on Ensembl identified 23,576 protein coding genes.

| S-EPMC10594052 | biostudies-literature

The genome sequence of the Gold Triangle, Hypsopygia costalis (Fabricius, 1775).

Project description:We present a genome assembly from an individual male Hypsopygia costalis (the Gold Triangle; Arthropoda; Insecta; Lepidoptera; Pyralidae). The genome sequence is 818 megabases in span. Most of the assembly is scaffolded into 31 chromosomal pseudomolecules with the Z sex chromosome assembled. The mitochondrial genome has also been assembled and is 15.3 kilobases in length. Gene annotation of this assembly on Ensembl identified 19,248 protein coding genes.

| S-EPMC10687387 | biostudies-literature

The genome sequence of a snail-killing fly, Coremacera marginata (Fabricius, 1775).

Project description:We present a genome assembly from an individual female Coremacera marginata (Arthropoda; Insecta; Diptera; Sciomyzidae). The genome sequence is 980 megabases in span. The majority of the assembly (99.84%) is scaffolded into six chromosomal pseudomolecules, with the X sex chromosome assembled.

| S-EPMC9647149 | biostudies-literature

The genome sequence of a beetle-killing wasp, Tiphia femorata (Fabricius, 1775).

Project description:We present a genome assembly from an individual female Tiphia femorata (a beetle-killing wasp; Arthropoda; Insecta; Hymenoptera; Tiphilidae). The genome sequence is 276 megabases in span. Most of the assembly (98.73%) is scaffolded into 12 chromosomal pseudomolecules. The complete mitochondrial genome was also assembled and is 22.4 kilobases in length. Annotation of the genome in Ensembl identified 10,470 protein-coding genes.

| S-EPMC10687388 | biostudies-literature

The genome sequence of the black clock beetle, Pterostichus madidus (Fabricius, 1775).

Project description:We present a genome assembly from an individual female Pterostichus madidus (the black clock beetle; Arthropoda; Insecta; Coleoptera; Carabidae). The genome sequence is 705 megabases in span. The majority (99.96%) of the assembly is scaffolded into 19 chromosomal pseudomolecules, with the X sex chromosome assembled.

| S-EPMC9315234 | biostudies-literature

The genome sequence of the long-horned flat-body, Carcina quercana (Fabricius, 1775).

Project description:We present a genome assembly from an individual male Carcina quercana (the long-horned flat-body; Arthropoda; Insecta; Lepidoptera; Depressariidae). The genome sequence is 409 megabases in span. Most of the assembly (99.96%) is scaffolded into 30 chromosomal pseudomolecules, including the assembled Z sex chromosome. The complete mitochondrial genome was also assembled and is 15.3 kilobases in length. Gene annotation of this assembly on Ensembl identified 18,108 protein coding genes.

| S-EPMC10220420 | biostudies-literature

Pollinator effectiveness and importance between female and male mining bee (Andrena).

Project description:Bees are often considered to be effective pollinators in both agricultural and natural ecosystems but could be ineffective pollinators in that they collect large quantities of pollen for food provision but deliver little to stigmas. Male bees do not collect pollen to feed larvae, and their pollination role has been underappreciated. Here we compare pollination effectiveness, visit frequency and pollen foraging behaviour between female and male individuals of a mining bee, Andrena emeishanica, visiting a nectariferous spring flower (Epimedium pubescens). Female bees were observed to forage for both pollen and nectar, but male bees foraged only for nectar. Female bees had large hairy hind tibiae with conspicuous scopae, and nearly 90% of the pollen grains they collected went onto the hind legs. Male bees removed less pollen from anthers than female bees but deposited more pollen on stigmas per visit. The higher pollen transfer efficiency of male bees was due to 48.4% of pollen grains remaining ungroomed on the thorax and abdomen, available for stigma contact, but their visitation rate to flowers was much lower. Our results indicate that male solitary bees could transfer more pollen on the stigma per visit but were less important (transferred less pollen in total, because they made fewer visits per unit time) than females.

| S-EPMC6832193 | biostudies-literature

The genome sequence of an ichneumonid wasp, Heteropelma amictum (Fabricius, 1775) [version 1; peer review: 2 approved]

Project description: Not available

| S-EPMC10905020 | biostudies-literature