Organ-oriented proteogenomics functional atlas of three aquatic invertebrate sentinel species.

ABSTRACT: Proteogenomic methodologies have enabled the identification of protein sequences in wild species without annotated genomes, shedding light on molecular mechanisms affected by pollution. However, proteomic resources for sentinel species are limited, and organ-level investigations are necessary to expand our understanding of their molecular biology. This study presents proteomic resources obtained from proteogenomic analyses of key organs (hepatopancreas, gills, hemolymph) from three established aquatic sentinel invertebrate species of interest in ecotoxicological/ecological research and environmental monitoring: Gammarus fossarum, Dreissena polymorpha, and Palaemon serratus. Proteogenomic analyses identified thousands of proteins for each species, with over 90% of them being annotated to pu

SUBMITTER: Lepretre M 

PROVIDER: S-EPMC10514328 | biostudies-literature | 2023 Sep

REPOSITORIES: biostudies-literature