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BubbleHeatmap: an R package for visualization of nightingale health metabolomics datasets.

ABSTRACT:

Summary

We present bubbleHeatmap, an R plotting package which combines elements of a bubble plot and heatmap to conveniently display two numerical variables for each data point across a categorical two dimensional grid. This has particular advantages for visualizing the 251 metabolomic measures produced by the automated, high-throughput, ¹H-NMR-based platform provided by Nightingale Health, which includes 12 measures repeated across each of 14 lipoprotein subclasses. As these metabolomic profiles are currently available for large biobanks, we provide a figure template to aid the use of bubbleHeatmap in displaying results from analyses using these data.

Availability and implementation

https://cran.r-project.org/web/packages/bubbleHeatmap.

SUBMITTER: Boxall R

PROVIDER: S-EPMC10518075 | biostudies-literature | 2023

REPOSITORIES: biostudies-literature

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bubbleHeatmap: an R package for visualization of nightingale health metabolomics datasets.

Boxall Ruth R Holmes Michael V MV Walters Robin G RG

Bioinformatics advances 20230912 1

<h4>Summary</h4>We present bubbleHeatmap, an R plotting package which combines elements of a bubble plot and heatmap to conveniently display two numerical variables for each data point across a categorical two dimensional grid. This has particular advantages for visualizing the 251 metabolomic measures produced by the automated, high-throughput, <sup>1</sup>H-NMR-based platform provided by Nightingale Health, which includes 12 measures repeated across each of 14 lipoprotein subclasses. As these ...[more]

PMID: 37750069

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